Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015951580.1_cds_XP_016491577.1_81876
CDS Infomation

[gene=LOC107811204] [db_xref=GeneID:107811204] [protein=uncharacterized protein LOC107811204 isoform X2] [protein_id=XP_016491577.1] [location=complement(join(9449..9754,9991..10107,10206..10289,10418..10477,10609..10708,10799..11151,11240..11394,11505..11736,11980..12096,12189..12290,12790..12849))] [gbkey=CDS]
Sequence

ATGAATGCCAGAGTCAGGACTAGTCTACAGTCTTTGAAAACTCCATCCAAAAATGTAAAG
GAAAAAGTGGAAATGCAAGGAGATAGGAAAATGGGTGCCGAGAAAACAACCATAAATAGA
AGAAAAGCAATCAGAGAAAGAAAGATGGCATTGTTACAAGATGTTGATAAGCTAAAGAAG
AAACTCAGGCACGAGGAAAACGTCCACAGAGCTCTCGAAAGGGCGTTTACTAGACCTCTC
GGTGCTCTTCCTCGTCTTCCTCCTTATCTCCCTCCAAATACACTGGAGCTTCTAGCTGAA
GTGGCTGTTTTGGAGGAGGAAGTTGTTCGACTAGAAGAGAAAGTTGTGCATTTCAGGCAA
GGATTGTATCAGGAAGCGGTCTATATTTCGTCTTCCAAGAGGAATATGGATAATGTAACT
GATACTACTGAACCAAATCAAGTAAAGAGTCCCAAGCAGAAGCAAACGAAGTTGTCACCC
CAAATGGAAGCGAATTCAGCTTCATTTTCAGATGACAGCTGCTTAAAAGAGAATCAGTCA
TGGTCTTCCACGAAAAGCAAGCATCGATCACTAAATGCGAAAGTGAAAACTGTCAAAACT
CCTGCTAAGAAGCTTCCTTCTGAGAACAGATTAGCAGAGAAGCGCGTAGATCCTCCGAAA
TTGCAGCTTGAGGACCAAGTAGTGTACCACGGGAGTTTGGAAGAGAGAGTCTTTGTTAAT
CAAGACAGAAAACCGTCATCAGCTGAAAGTCCAAATACAATCTCAGAAAATATTCTGAAA
TGCTTGTTAAATATTTTCCTCAGAATGAGCTCTAAGAAGAGCAGGAGTACAACCGATACA
TTGCCTTCATTGACAGGATATAATTCATGTGAGAAGAAAGAGTTTGGAGATCCTTATGGC
ATATGTTCAAGGTTTGAAAGGAGAGATATCGGTCCGTATAAGCATTTATATGCAGTTGAA
GCTTCTTCAATCAATCCAAATCGAACAACAATATCCGTTTTCCTAGTTCGTAGACTAAAA
CTTCTACTCGAGAAACTTGCATCAGTCAACTTACAGGGCCTCACCCACCAAGAAAAGCTT
GCTTTCTGGATCAACATATATAATTCCTGCATGATGAATGCATTCCTGGAGTATGGCCTA
CCTGAGAATCCTGAAATGGTTGTGGCACTGATGCAAAAGGCAACAATAAATGTTAGCGGA
CACTTGCTTAATGCCATAACCATTGAACACTTCATTCTGAGGTTACCTTATCACTCAAAA
TATACTTTTGCAAAGGGTGTAAAGAATGACGAGATGACTGCACGCAGCATCTTTGGTTTG
GAGTTTTCAGAAACATTGGTGACATTTGCGCTCTCTTGTGGAAGTTTTTCCTCTCCTGCT
GTGAGAGTATACACTGCAGCAAATATTGAAAATGAGCTTCAAGTTGCAAAGAGGGAGTAT
TTGCAGGCAGCTGTTGGCATTTCAACATCAAAGAAGTTGGTAGCAATACCAAAACTGTTG
GATTGGTATCTGCTAGATTTTGCAAAGGATTTGGAGTCTCTACTTGATTGGATATGTCTT
CAACTGCCAAACGAACGTGGAAAAGAAGCGATTAGCTGCCTCGAGAGAAGGAATAACGAG
CCTCTTTCTCATGTTCTTCAGATTATGCCATATGAATTTAGTTTCCGGTACCTTTTACAC
ATGTAA

Peptide Sequence

PEP ID

XP_016491577.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107811204 isoform X2 [Nicotiana tabacum]
Sequence

MNARVRTSLQSLKTPSKNVKEKVEMQGDRKMGAEKTTINRRKAIRERKMALLQDVDKLKK
KLRHEENVHRALERAFTRPLGALPRLPPYLPPNTLELLAEVAVLEEEVVRLEEKVVHFRQ
GLYQEAVYISSSKRNMDNVTDTTEPNQVKSPKQKQTKLSPQMEANSASFSDDSCLKENQS
WSSTKSKHRSLNAKVKTVKTPAKKLPSENRLAEKRVDPPKLQLEDQVVYHGSLEERVFVN
QDRKPSSAESPNTISENILKCLLNIFLRMSSKKSRSTTDTLPSLTGYNSCEKKEFGDPYG
ICSRFERRDIGPYKHLYAVEASSINPNRTTISVFLVRRLKLLLEKLASVNLQGLTHQEKL
AFWINIYNSCMMNAFLEYGLPENPEMVVALMQKATINVSGHLLNAITIEHFILRLPYHSK
YTFAKGVKNDEMTARSIFGLEFSETLVTFALSCGSFSSPAVRVYTAANIENELQVAKREY
LQAAVGISTSKKLVAIPKLLDWYLLDFAKDLESLLDWICLQLPNERGKEAISCLERRNNE
PLSHVLQIMPYEFSFRYLLHM

Transcript Sequence

Gene sequence data has not been registered.